Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs6987059 | chr8:11071057 | A/G | SGK223 | chr8:8175258-8244008:- | 0.47 | 8.66 | 7.3E-17 | Box Plot |
| THCA | rs6987134 | chr8:10804906 | T/C | SGK223 | chr8:8175258-8244008:- | 0.36 | 6.71 | 5.59E-11 | Box Plot |
| THCA | rs6987390 | chr8:9284900 | A/G | SGK223 | chr8:8175258-8244008:- | 0.37 | 6.36 | 4.78E-10 | Box Plot |
| THCA | rs6987527 | chr8:3251992 | C/G | CSMD1 | chr8:2792875-4852494:- | -0.53 | -6.13 | 1.87E-9 | Box Plot |
| THCA | rs6987767 | chr8:10910066 | T/C | SGK223 | chr8:8175258-8244008:- | -0.47 | -9.09 | 2.62E-18 | Box Plot |
| THCA | rs6987781 | chr8:3267473 | A/T | CSMD1 | chr8:2792875-4852494:- | -0.48 | -8.81 | 2.29E-17 | Box Plot |
| THCA | rs6988922 | chr8:11194911 | A/G | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.75 | 4.19E-11 | Box Plot |
| THCA | rs6989657 | chr8:10330873 | C/G | SGK223 | chr8:8175258-8244008:- | -0.39 | -7.08 | 5.22E-12 | Box Plot |
| THCA | rs6990395 | chr8:10871047 | A/G | SGK223 | chr8:8175258-8244008:- | 0.41 | 7.32 | 1.08E-12 | Box Plot |
| THCA | rs6990498 | chr8:3264756 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.51 | -10.04 | 1.23E-21 | Box Plot |
| THCA | rs6990563 | chr8:11188752 | G/A | SGK223 | chr8:8175258-8244008:- | -0.35 | -6.56 | 1.37E-10 | Box Plot |
| THCA | rs6991606 | chr8:11176159 | G/A | SGK223 | chr8:8175258-8244008:- | -0.38 | -7.15 | 3.21E-12 | Box Plot |
| THCA | rs6992033 | chr8:10790525 | C/T | SGK223 | chr8:8175258-8244008:- | 0.37 | 7.07 | 5.36E-12 | Box Plot |
| THCA | rs6992818 | chr8:10331209 | C/G | SGK223 | chr8:8175258-8244008:- | -0.32 | -6.08 | 2.47E-9 | Box Plot |
| THCA | rs6993217 | chr8:3261117 | T/A | CSMD1 | chr8:2792875-4852494:- | -0.49 | -10.07 | 9.47E-22 | Box Plot |